Index A | C | D | E | F | G | I | L | M | N | P | R | S | X A analysis() (pywindow.DLPOLY method) (pywindow.PDB method) (pywindow.XYZ method) analysis_output (pywindow.DLPOLY attribute) (pywindow.XYZ attribute) atom_ids (pywindow.Molecule attribute) C calculate_average_diameter() (pywindow.Molecule method) calculate_centre_of_mass() (pywindow.Molecule method) calculate_maximum_diameter() (pywindow.Molecule method) calculate_pore_diameter() (pywindow.Molecule method) calculate_pore_diameter_opt() (pywindow.Molecule method) calculate_pore_volume() (pywindow.Molecule method) calculate_pore_volume_opt() (pywindow.Molecule method) calculate_windows() (pywindow.Molecule method) compare_properties_dict() (in module pywindow) coordinates (pywindow.Molecule attribute) D decipher_atom_keys() (pywindow.MolecularSystem method) DLPOLY (class in pywindow) dump_molecule() (pywindow.Molecule method) dump_properties_json() (pywindow.Molecule method) dump_system() (pywindow.MolecularSystem method) dump_system_json() (pywindow.MolecularSystem method) E elements (pywindow.Molecule attribute) F filename (pywindow.XYZ attribute) filepath (pywindow.DLPOLY attribute) (pywindow.XYZ attribute) frames (pywindow.DLPOLY attribute) (pywindow.XYZ attribute) full_analysis() (pywindow.Molecule method) G get_frames() (pywindow.DLPOLY method) (pywindow.PDB method) (pywindow.XYZ method) I Input (class in pywindow) L load_file() (pywindow.Input method) (pywindow.MolecularSystem class method) load_rdkit_mol() (pywindow.Input method) (pywindow.MolecularSystem class method) (pywindow.Molecule class method) load_system() (pywindow.MolecularSystem class method) M make_modular() (pywindow.MolecularSystem method) make_supercell() (in module pywindow) module pywindow mol (pywindow.Molecule attribute) molecular_weight() (pywindow.Molecule method) MolecularSystem (class in pywindow) Molecule (class in pywindow) molecule_id (pywindow.Molecule attribute) molecules (pywindow.MolecularSystem attribute) N no_of_atoms (pywindow.Molecule attribute) P parent_system (pywindow.Molecule attribute) PDB (class in pywindow) properties (pywindow.Molecule attribute) pywindow module R rebuild_system() (pywindow.MolecularSystem method) S save_analysis() (pywindow.DLPOLY method) (pywindow.PDB method) (pywindow.XYZ method) save_frames() (pywindow.DLPOLY method) (pywindow.PDB method) (pywindow.XYZ method) shift_to_origin() (pywindow.Molecule method) swap_atom_keys() (pywindow.MolecularSystem method) system (pywindow.MolecularSystem attribute) system_id (pywindow.DLPOLY attribute) (pywindow.MolecularSystem attribute) (pywindow.XYZ attribute) system_to_molecule() (pywindow.MolecularSystem method) X XYZ (class in pywindow)